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Copyright ©2014 Baishideng Publishing Group Inc.
World J Gastroenterol. Oct 28, 2014; 20(40): 14696-14705
Published online Oct 28, 2014. doi: 10.3748/wjg.v20.i40.14696
Table 1 Advantages and disadvantages of small RNA and DNA based gene therapy
StrategyMechanisms of actionAdvantagesDisadvantages
Antisense ODNRNA-antisense ODN heteroduplex activates RNase H that can degrade the duplexesAntisense ODN physically block the ribosome translocation sterically by hybridizationAntisense ODN can be introduced directly into cellAvailability of chemical modification of antisense ODNStability in cells (endonucleolytic and exonucleolytic degradation)Modified antisense ODN stimulates the immune systemDesign and synthesis is more complicated compared with other strategies
siRNAsiRNA incorporated into RISC, which leads to the rapid degradation of the entire mRNA moleculeGreat specificity and efficacy: thermodynamic end stability, target mRNA accessibilityNon-specific gene silencing
Activation of immune response
RNA degradation by endonuclease
Expensive for larger experiments
miRNASmall, non-protein coding RNAs that guide the post-transcriptional repression of mRNA binding at 3’ UTR regionmiRNA ability to regulate multiple genesCost effective for long-term experimentsNeed for cloning and verification of insert
Activation of immune response
RNA degradation by endonuclease
Decoy ODNDouble stranded oligonucleotide containing an enhancer cis-elementSpecifically inhibits transcription factor functionTransfection efficiency and delivery to cells
Target transcription factor binds to decoy ODN and block the interaction of target gene transcriptionAllows for the regulation of endogenous and pathological gene expressionDNA degradation by endonuclease