Molecular identification of hepatitis B virus genotypes/subgenotypes: Revised classification hurdles and updated resolutions

doi:10.3748/wjg.v20.i23.7152

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World Journal of Gastroenterology

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1007-9327

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

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World J Gastroenterol. Jun 21, 2014; 20(23): 7152-7168
Published online Jun 21, 2014. doi: 10.3748/wjg.v20.i23.7152

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Figure 1 Neighbour-joining phylogenetic tree was conducted based on hepatitis B virus full-length genomes of all proposed genotypes and subgenotypes before (A) and after (B) reclassification. HBV genome sequence that used are listed below: JN182318: A1; HE576989: A2; AB194951: A3; AY934764: A4; FJ692613: A5; GQ331047: A6; FN545833: A7; AB642091: B1; FJ899779: B2; GQ924617: B3; GQ924626: B4; GQ924640: B5; JN792893: B6; GQ358137: B7; GQ358147: B8; GQ358149: B9; AB697490: C1; GQ358158: C2; DQ089801: C3; HM011493: C4; EU410080: C5; EU670263: C6; GU721029: C7; AP011106: C8; AP011108: C9; AB540583: C10; AB554019: C11; AB554025: C12; AB644280: C13; AB644284: C14; AB644286: C15; AB644287: C16; GU456636: D1; GQ477452: D2; EU594434: D3; GQ922003: D4; GQ205377: D5; KF170740: D6; FJ904442: D7; FN594770: D8; JN664942: D9; FN594748: E; FJ709464: F1b; DQ899146: F2b; AY090459: F1a; DQ899142: F2a; AB036920: F3; AF223965: F4; GU563556: G; AB516393: H; FJ023659: I1; FJ023664: I2 ; AB486012: J and AY226578: Woolly monkey as an out-group. HBV: Hepatitis B virus.

Citation: Pourkarim MR, Amini-Bavil-Olyaee S, Kurbanov F, Van Ranst M, Tacke F. Molecular identification of hepatitis B virus genotypes/subgenotypes: Revised classification hurdles and updated resolutions. World J Gastroenterol 2014; 20(23): 7152-7168
URL: https://www.wjgnet.com/1007-9327/full/v20/i23/7152.htm
DOI: https://dx.doi.org/10.3748/wjg.v20.i23.7152