Target genes discovery through copy number alteration analysis in human hepatocellular carcinoma

Table 2 List of some integrated cancer genomic databases

Database	Project	Website	Ref.
cBioPortal for cancer genome	Project provides visualization, analysis and download of large-scale cancer genomic data sets	http://www.cbioportal.org/public-portal/	Cerami et al[57]
COSMIC	Catalogue of somatic mutations in cancer	http://cancer.sanger.ac.uk/cancergenome/projects/cosmic/	Forbes et al[58]
ICGC	International Cancer Genome Consortium provides tools for visualizing, querying and downloading the data.	http://dcc.icgc.org/	Joly et al[59]
TCGA data portal	A platform for researchers to search, download, and analyze data sets generated by TCGA	https://tcga-data.nci.nih.gov/tcga/tcgaHome2.jsp
Tumorscape	High-resolution copy number data collected from multiple cancer types	http://www.broadinstitute.org/tumorscape/pages/portalHome.jsf
UCSC cancer genome browser	A set of web-based tools to display, investigate and analyze cancer genomic data and associated clinical information	https://genome-cancer.ucsc.edu/proj/site/hgHeatmap/	Goldman et al[60]

COSMIC: Catalogue of somatic mutations in cancer.