Diversity of Helicobacter pylori genotypes in Iranian patients with different gastroduodenal disorders

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Sep 14, 2013 (publication date) through Nov 3, 2024

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World Journal of Gastroenterology

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1007-9327

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

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World J Gastroenterol. Sep 14, 2013; 19(34): 5685-5692
Published online Sep 14, 2013. doi: 10.3748/wjg.v19.i34.5685

Table 1 Primers used in this study

Gene	Primers (5’→3’)	PCR product (bp)	Annealing temperature (°C)	Ref.
vacA (s₁/s₂)	VA1F: ATGGAAATACAACAAACACAc	259-286	55	[6]
vacA (s₁/s₂)	VA1R: CTGCTTGAATGCGCCAAAC	259-286	55	[6]
vacA (m₁/m₂)	VACm1m2F: CAATCTGTCCAATCAAGCGAG	567-642	55	[15]
vacA (m₁/m₂)	VACm1m2R: GCGTCAAAATAATTCCAAGG	567-642	55	[15]
cagA	CagAF: AATACACCAACGCCTCCAAG	400	59	[16]
cagA	CagAR: TTGTTGCCGCTTTTGCTCTC	400	59	[16]
iceA₁	iceA1F: TATTTCTGGAACTTGCGCAACCTGAT	approximately 900	58	[17]
iceA₁	M.Hpy1R: GGCCTACAACCGCATGGATAT	approximately 900	58	[17]
iceA₂	iceA2 F: CGGCTGTAGGCACTAAAGCTA	approximately 800	58	[17]
iceA₂	iceA2 R: TCAATCCTATGTGAAACAATGATCGTT	approximately 800	58	[17]
babA	babAF: CCAAACGAAACAAAAAGCGT	271	58	[18]
babA	babAR: GCTTGTGTAAAAGCCGTCGT	271	58	[18]
glmM	GlmM2-F GGATAAGCTTTTAGGGGTGTTAGGGG	296	52	[19]
glmM	GlmM1-R GCTTACTTTCTAACACTAACGCGC	296	52	[19]

Citation: Vaziri F, Peerayeh SN, Alebouyeh M, Mirzaei T, Yamaoka Y, Molaei M, Maghsoudi N, Zali MR. Diversity of Helicobacter pylori genotypes in Iranian patients with different gastroduodenal disorders. World J Gastroenterol 2013; 19(34): 5685-5692
URL: https://www.wjgnet.com/1007-9327/full/v19/i34/5685.htm
DOI: https://dx.doi.org/10.3748/wjg.v19.i34.5685