Copyright
©2013 Baishideng Publishing Group Co.
World J Gastroenterol. Jun 7, 2013; 19(21): 3249-3254
Published online Jun 7, 2013. doi: 10.3748/wjg.v19.i21.3249
Published online Jun 7, 2013. doi: 10.3748/wjg.v19.i21.3249
Table 2 Up- or down-regulated genes in rectal cancer biopsies
Fold | False discovery rate | ID | Gene title | Symbol |
Up-regulated genes | ||||
2.649 | 0 | AI827789 | Anterior gradient homolog 3 (Xenopus) | AGR3 |
3.427 | 0 | AA743462 | - | - |
2.524 | 0 | NM_006472 | Thioredoxin interacting protein | TXNIP |
5.514 | 0 | AB018305 | Spondin 1, extracellular matrix protein | SPON1 |
2.95 | 7.551 | NM_152315 | Family with sequence similarity 55, A | FAM55A |
3.289 | 7.551 | AL536553 | Neural precursor cell expressed, developmentally down-regulated 4-like | NEDD4L |
2.684 | 7.551 | AF055009 | cAMP responsive element binding protein 3-like 1 | CREB3L1 |
3.111 | 7.551 | AL137063 | A kinase (PRKA) anchor protein 7 | AKAP7 |
2.717 | 7.551 | AF266504 | Chemokine (C-C motif) ligand 28 | CCL28 |
2.546 | 8.39 | BF589413 | FERM domain containing 3 | FRMD3 |
2.637 | 8.39 | AA554045 | Polypeptide N-acetylgalactosaminyltransferase 12 | GALNT12 |
3.047 | 8.39 | NM_030926 | Integral membrane protein 2C | ITM2C |
2.775 | 8.39 | AW026379 | Tumor necrosis factor receptor superfamily, member 11a | TNFRSF11A |
2.609 | 8.39 | U38654 | RAB27A, member RAS family | RAB27A |
2.629 | 8.39 | NM_003570 | Cytidine monophosphate-N-acetylneuraminic acid hydroxylase pseudogene | CMAH |
2.521 | 8.58 | AV728268 | Chromosome 11 open reading frame 32 | C11orf32 |
2.579 | 8.58 | NM_016929 | Chloride intracellular channel 5 | CLIC5 |
2.541 | 10.487 | NM_016548 | Golgi membrane protein 1 | GOLM1 |
2.728 | 10.487 | AW162846 | Calcium/calmodulin-dependent protein kinase II inhibitor 1 | CAMK2N1 |
2.806 | 10.487 | AI659927 | prostate androgen-regulated mucin-like protein 1 | PARM1 |
2.896 | 10.487 | NM_024709 | Chromosome 1 open reading frame 115 | C1orf115 |
3.333 | 10.487 | NM_005629 | Solute carrier family 6 member 8 | SLC6A8 |
2.869 | 10.487 | NM_019062 | Ring finger protein 186 | RNF186 |
3.174 | 10.487 | AK025181 | Intestine-specific homeobox | ISX |
3.968 | 10.487 | AB007899 | Neural precursor cell expressed, developmentally down-regulated 4-like | NEDD4L |
8.2 | 10.487 | NM_001873 | Carboxypeptidase E | CPE |
4.845 | 10.487 | NM_014479 | ADAM-like, decysin 1 | ADAMDEC1 |
2.56 | 10.487 | BF195709 | Calpain 5 | CAPN5 |
2.601 | 10.487 | NM_014456 | Programmed cell death 4 | PDCD4 |
2.931 | 10.787 | AW971415 | cDNA clone IMAGE:5745639 | - |
2.787 | 10.787 | NM_005173 | ATPase, Ca++ transporting, ubiquitous | ATP2A3 |
Down-regulated genes | ||||
0.265 | 8.58 | AI378647 | Coagulation factor II (thrombin) receptor-like 2 | F2RL2 |
0.356 | 8.58 | BG200951 | Pvt1 oncogene homolog, MYC activator | PVT1 |
0.322 | 10.787 | AL109839 | Poly(A) binding protein, cytoplasmic 1-like | PABPC1L |
0.356 | 10.787 | NM_005978 | S100 calcium binding protein A2 | S100A2 |
0.373 | 10.787 | AL041761 | Transcribed locus | - |
0.38 | 10.787 | D86983 | Peroxidasin homolog (Drosophila) | PXDN |
- Citation: Supiot S, Gouraud W, Campion L, Jezéquel P, Buecher B, Charrier J, Heymann MF, Mahé MA, Rio E, Chérel M. Early dynamic transcriptomic changes during preoperative radiotherapy in patients with rectal cancer: A feasibility study. World J Gastroenterol 2013; 19(21): 3249-3254
- URL: https://www.wjgnet.com/1007-9327/full/v19/i21/3249.htm
- DOI: https://dx.doi.org/10.3748/wjg.v19.i21.3249