Brief Article
Copyright ©2012 Baishideng Publishing Group Co.
World J Gastroenterol. Feb 7, 2012; 18(5): 479-488
Published online Feb 7, 2012. doi: 10.3748/wjg.v18.i5.479
Table 3 Putative virulence factors identified in the genome of Bifidobacterium longum JDM301
QueryIdentitySubjectPredicted functions
BLJ_108924.9VFG09342,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
BLJ_183526.36VFG09342,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
BLJ_032329.3VFG09342,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
BLJ_147622.11VFG23786 kDa early secretory antigenic target esxA
BLJ_099232.98VFG0869AatC ATB binding protein of ABC transporter
BLJ_108034.81VFG0869AatC ATB binding protein of ABC transporter
BLJ_196837.3VFG0869AatC ATB binding protein of ABC transporter
BLJ_077037.43VFG0869AatC ATB binding protein of ABC transporter
BLJ_002635.71VFG1404ahpC
BLJ_013628.73VFG2218ATPase VirB11 homolog
BLJ_088024.18VFG1042ATP-binding protein FecE
BLJ_078747.92VFG0077ATP-dependent Clp protease proteolytic subunit
BLJ_078653.8VFG0077ATP-dependent Clp protease proteolytic subunit
BLJ_094837.66VFG2162Bile salt hydrolase
BLJ_124322.97VFG2242Conjugal transfer protein trag
BLJ_055126.54VFG1108Conserved hypothetical protein
BLJ_195129.85VFG1269Cyclolysin secretion ATP-binding protein
BLJ_192532.31VFG1269Cyclolysin secretion ATP-binding protein
BLJ_186345.5VFG0079Endopeptidase Clp ATP-binding chain C
BLJ_146556.77VFG0079Endopeptidase Clp ATP-binding chain C
BLJ_071330.12VFG0925Ferric enterobactin transport ATP-binding protein fepC
BLJ_187225.51VFG2225GDP-mannose 4,6-dehydratase
BLJ_132432.49VFG1399glnA1
BLJ_062462.11VFG1399glnA1
BLJ_183429.47VFG0313Glucose/galactose transporter
BLJ_192630.02VFG1557HlyB protein
BLJ_147756.12VFG1855Hsp60, 60K heat shock protein HtpB
BLJ_006426.21VFG1397hspX
BLJ_144440.85VFG1563Hypothetical protein
BLJ_160627.78VFG1593Hypothetical protein
BLJ_164030.81VFG1593Hypothetical protein
BLJ_001122.16VFG1604Hypothetical protein
BLJ_151326.3VFG1604Hypothetical protein
BLJ_184627.67VFG1604Hypothetical protein
BLJ_033744.25VFG1630Hypothetical protein
BLJ_033644.38VFG1630Hypothetical protein
BLJ_150023.53VFG1963Hypothetical protein Cj1435c
BLJ_116924.64VFG1390Hypothetical protein Rv0981
BLJ_070836.8VFG1390Hypothetical protein Rv0981
BLJ_080228.83VFG1824Hypothetical protein Rv3133c
BLJ_135730.46VFG1824Hypothetical protein Rv3133c
BLJ_111332.41VFG1824Hypothetical protein Rv3133c
BLJ_083532.42VFG1824Hypothetical protein Rv3133c
BLJ_085927.93VFG1206Iron(III) ABC transporter, ATP-binding protein
BLJ_034828.13VFG1206Iron(III) ABC transporter, ATP-binding protein
BLJ_053029.29VFG1206Iron(III) ABC transporter, ATP-binding protein
BLJ_201635.81VFG1206Iron(III) ABC transporter, ATP-binding protein
BLJ_187536.19VFG1627IS100 transposase; transposase ORFA
BLJ_124937.55VFG1627IS100 transposase; transposase ORFA
BLJ_125239.22VFG1627IS100 transposase; transposase ORFA
BLJ_093042.29VFG1627IS100 transposase; transposase ORFA
BLJ_196630.68VFG1485L7045
BLJ_185059.7VFG1411leuD
BLJ_037939.24VFG0320Lipopolysaccharide core biosynthesis protein (kdtB)
BLJ_154922.02VFG1817mbtA
BLJ_120425.8VFG0574Mg<up>2+</up> transport protein
BLJ_201030.62VFG0574Mg<up>2+</up> transport protein
BLJ_127028.62VFG1116N-acetylglucosamine-6-phosphate deacetylase
BLJ_183221.89VFG1109N-acetylneuraminate lyase, putative
BLJ_049025.95VFG1109N-acetylneuraminate lyase, putative
BLJ_002126.83VFG0307Neutrophil activating protein (bacterioferritin)
BLJ_188924.14VFG2227O-antigen export system permease protein
BLJ_125126.05VFG1461ORF A protein
BLJ_021430.5VFG0594Pathogenicity island encoded protein: SPI3
BLJ_015933.25VFG0594Pathogenicity island encoded protein: SPI3
BLJ_147457.32VFG1386phoP
BLJ_170325.65VFG2220Phosphoglucomutase
BLJ_049728.35VFG2362Phosphomannomutase
BLJ_113725.1VFG1983ABC-type amino-acid transporter periplasmic solute-binding protein
BLJ_050825.93VFG1983ABC-type amino-acid transporter periplasmic solute-binding protein
BLJ_145329.27VFG1983ABC-type amino-acid transporter periplasmic solute-binding protein
BLJ_040838.22VFG2059ATP-binding component of ABC transporter
BLJ_048027.04VFG2061Phosphoprotein phosphatase
BLJ_080528.09VFG1384proC
BLJ_139631.06VFG1384proC
BLJ_058426.09VFG1387purC
BLJ_177222.28VFG0480Putative amino acid permease
BLJ_053825.17VFG0480Putative amino acid permease
BLJ_132924.42VFG1965Putative aminotransferase
BLJ_002530.45VFG2301Putative carbonic anhydrase
BLJ_092223.51VFG0031Putative glycosyl transferase
BLJ_167038.88VFG1668Putative lysil-tRNA synthetase LysU
BLJ_056325VFG1498Putative periplasmic solute binding protein
BLJ_117128.48VFG0483Putative regulatory protein, deoR family
BLJ_151729.25VFG0483Putative regulatory protein, deoR family
BLJ_034437.02VFG1702Putative response regulator
BLJ_004027.91VFG1746Putative two-component response regulator
BLJ_074029.13VFG1746Putative two-component response regulator
BLJ_110524.49VFG0168Pyochelin biosynthesis protein PchD
BLJ_040925.56VFG0168Pyochelin biosynthesis protein PchD
BLJ_072041.04VFG0479Pyruvate kinase I (formerly F), fructose stimulated
BLJ_116355.32VFG1826relA
BLJ_099525.84VFG1889Response regulator GacA
BLJ_167928.89VFG1889Response regulator GacA
BLJ_108340.89VFG0473Response regulator in two-component regulatory system with BasS
BLJ_127326.57VFG1115ROK family protein
BLJ_162026.62VFG1115ROK family protein
BLJ_162231.35VFG1115ROK family protein
BLJ_179627.31VFG0526Salmonella iron transporter: fur regulated
BLJ_066229.06VFG0526Salmonella iron transporter: fur regulated
BLJ_071225.4VFG0528Salmonella iron transporter: fur regulated
BLJ_117451.39VFG1405sigA
BLJ_125841.15VFG1412sigH
BLJ_134233.11VFG2161Signal peptidase II
BLJ_090621.73VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_192322.38VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_136022.88VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_142123.24VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_061123.31VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_183623.32VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_045923.33VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_127823.43VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_199823.51VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_152223.6VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_010923.63VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_041823.69VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_011823.7VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_052023.85VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_197624.27VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_009924.31VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_160524.34VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_013224.53VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_191224.58VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_091224.69VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_031824.71VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_151524.93VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_193325VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_171825VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_199725.36VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_040025.37VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_051527.08VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_132128.21VFG2197Sugar-binding transcriptional regulator, LacI family
BLJ_123229.83VFG1028Tn21 integrase IntI1
BLJ_116043.1VFG2168Transcriptional regulator, Cro/CI family
BLJ_074728.98VFG1122Transposase ORFAB, subunit B
BLJ_118043.64VFG1398trpD
BLJ_187139.62VFG1967UDP-galactopyranose mutase
BLJ_164439VFG2361UDP-glucose 4-epimerase
BLJ_168054.49VFG2361UDP-glucose 4-epimerase
BLJ_189152.63VFG0963UDP-glucose 6-dehydrogenase
BLJ_069746.15VFG1414whiB3