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©2011 Baishideng Publishing Group Co.
World J Gastroenterol. Apr 14, 2011; 17(14): 1910-1914
Published online Apr 14, 2011. doi: 10.3748/wjg.v17.i14.1910
Published online Apr 14, 2011. doi: 10.3748/wjg.v17.i14.1910
Table 3 Candidate marker genes for Shiga toxin producing Escherichia coli O157:H7
EDL933 | Sakai | EC4115 | 3000 bp flanking regions | Function | |||
Ident % | tRNA | Tpase | phage | ||||
wzy | ECs2844 | ECH74115_2973 | 78 | - | - | - | O antigen polymerase |
Z0372 | ECs0334 | ECH74115_0348 | 56 | - | - | - | Hypothetical protein |
Z0344 | ECs0307 | ECH74115_0324 | 50 | - | - | - | Hypothetical protein |
Z1539 | ECs1281 | ECH74115_1278 | 50 | - | - | - | Hypothetical protein |
Z3621 | ECs3239 | ECH74115_3589 | 13 | - | - | - | Hypothetical protein |
Z3271 | ECs2909 | ECH74115_3086 | 0 | - | - | - | Hypothetical protein |
Z0948 | ECs0804 | ECH74115_0880 | 9 | - | - | + | Hypothetical protein |
Z1328 | ECs1061 | ECH74115_1143 | 32 | - | - | + | Hypothetical protein |
Z1430 | ECs1165 | ECH74115_3572 | 0 | - | - | + | Hypothetical protein |
Z3348 | ECs2979 | ECH74115_3543 | 0 | + | - | + | Hypothetical protein |
Z3118 | ECs2755 | ECH74115_2802 | 0 | - | - | + | Hypothetical protein |
Z0244 | ECs0212 | ECH74115_0230 | 38 | - | + | + | Hypothetical protein |
Z1153/Z1592 | ECs5413 | ECH74115_1331 | 50 | - | - | - | Hypothetical protein |
Z2107/Z2378/ Z6055/Z3108 | ECs1960/ ECs2748 | ECH74115_2190/ ECH74115_2260/ ECH74115_2792 | 0 | + | + | + | Hypothetical protein |
Z1782/Z6064 | ECs2271 | ECH74115_3158/ ECH74115_1841/ ECH74115_2270/ ECH74115_1520 | 2 | - | - | + | Hypothetical protein |
- Citation: Wang GQ, Zhou FF, Olman V, Su YY, Xu Y, Li F. Computational prediction and experimental validation of novel markers for detection of STEC O157:H7. World J Gastroenterol 2011; 17(14): 1910-1914
- URL: https://www.wjgnet.com/1007-9327/full/v17/i14/1910.htm
- DOI: https://dx.doi.org/10.3748/wjg.v17.i14.1910