Interaction of the major inflammatory bowel disease susceptibility alleles in Crohn&rsquo;s disease patients

doi:10.3748/wjg.v16.i2.176

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Jan 14, 2010 (publication date) through Mar 7, 2025

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World Journal of Gastroenterology

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1007-9327

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

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World J Gastroenterol. Jan 14, 2010; 16(2): 176-183
Published online Jan 14, 2010. doi: 10.3748/wjg.v16.i2.176

Table 1 Primer sequences for the analysed variants

Gene	SNP	Primers (5’-3’)
IL23R	rs1004819	F: GCATTCTAGGACCGTTTTGG
		R: ATCTGGTGGAAATATGTGAAACCTA
IL23R	rs2201841	F: GGCAAAAGGGAATTGAGAGG
		R: GGCCTATGATTATGCTTTTTCCTG¹
ATG16L1	rs2241880	F: CTCTGTCACCATATCAAGCGTGG
		R: TCTAGAAGGACAGGCTATCAACAGATG
CARD15	rs2066844	F: GAGCCGCACAACCTTCAGATC
		R: ACTTGAGGTGCCCAACATTCAG
CARD15	rs2066845	F: GAGGCCACTCTGGGATTGAG
		R: TAGACTCTGAAGCTTACCTGCGC¹
CARD15	rs2066847	F: TGGCTAACTCCTGCAGTCTC
		R: GATCCTCAAAATTCTGCCATTC
IGR2198a_1	rs11739135	F: AGACACTGGGACATCATCTGTCTG
		R: GGGCAATTCTATGAGGACATTTAGA
IGR2096a_1	rs12521868	F: CAAGATTTCTGCCATAGCCTCCT
		R: GGAGGGTGGTGTAGCCAGAGTAG

¹Mismatch bases are underlined.

F: Forward; R: Reverse; IL23R: Interleukin-23 receptor; ATG16L1: Autophagy-related 16-like 1; CARD15: Caspase recruitment domain-containing protein 15.

Citation: Csöngei V, Járomi L, Sáfrány E, Sipeky C, Magyari L, Faragó B, Bene J, Polgár N, Lakner L, Sarlós P, Varga M, Melegh B. Interaction of the major inflammatory bowel disease susceptibility alleles in Crohn’s disease patients. World J Gastroenterol 2010; 16(2): 176-183
URL: https://www.wjgnet.com/1007-9327/full/v16/i2/176.htm
DOI: https://dx.doi.org/10.3748/wjg.v16.i2.176