Genome-wide differences in hepatitis C- vs alcoholism-associated hepatocellular carcinoma

doi:10.3748/wjg.14.1749

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World Journal of Gastroenterology

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1007-9327

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

Liver Cancer

World J Gastroenterol. Mar 21, 2008; 14(11): 1749-1758
Published online Mar 21, 2008. doi: 10.3748/wjg.14.1749

Table S1 Etiology-dependent location of dysregulated genes on chromosomes

HCV			Alcohol
gene	Hs. Number	chr.	gene	Hs. Number	chr.
Trans. Locus	Hs.597833	2	MAP3K2	Hs.145605	2q14.3
VAMP5	Hs.172684	2p11.2	WDFY1	Hs.642721	2q36.1
KCMF1	Hs.345694	2p11.2
LOC56902	Hs.262858	2p13.3
UGP2	Hs.516217	2p14-p13
CCT4	Hs.421509	2p15
KIAA1387	Hs.516182	2p16.1
MRPL33	Hs.515879	2p21
FNDC4	Hs.27836	2p23.3
FOSL2	Hs.220971	2p23.3
CKAP2L	Hs.434250	2q13
CXCR4	Hs.421986	2q21
ZAK	Hs.444451	2q24.2
LEREPO4	Hs.368598	2q32.2
CLK1	Hs.433732	2q33
MAP2	Hs.368281	2q34-q35
CPS1	Hs.149252	2q35
NHEJ1	Hs.225988	2q35
WDFY1	Hs.642721	2q36.1
AGXT	Hs.144567	2q36-q37
TNRC15	Hs.565319	2q37.1
DGKD	Hs.471675	2q37.1
STK25	Hs.516807	2q37.3
LONRF1	Hs.180178	8p23	PLAT	Hs.491582	8p12
EXOSC4	Hs.632041	8q24.3	CLU	Hs.436657	8p21-p12
TIGD5	Hs.71574	8q24.3	FGL1	Hs.491143	8p22-p21.3
			MCM4	Hs.460184	8q11.2
			FAM92A1	Hs.125038	8q22.1
			EXOSC4	Hs.632041	8q24.3
			TIGD5	Hs.71574	8q24.3
			RPL8	Hs.178551	8q24.3

The genes shown here are those located on the significant chrs in Figure 1. They are referred to by an Hs. number as a unique identifier. Every such gene had an mRNA level that was significantly altered in tumor vs cirrhosis in at least 25% of the patients within at least one etiology.

Citation: Derambure C, Coulouarn C, Caillot F, Daveau R, Hiron M, Scotte M, François A, Duclos C, Goria O, Gueudin M, Cavard C, Terris B, Daveau M, Salier JP. Genome-wide differences in hepatitis C- vs alcoholism-associated hepatocellular carcinoma. World J Gastroenterol 2008; 14(11): 1749-1758
URL: https://www.wjgnet.com/1007-9327/full/v14/i11/1749.htm
DOI: https://dx.doi.org/10.3748/wjg.14.1749