Amplification of chromosome 21q22.3 harboring trefoil factor family genes in liver fluke related cholangiocarcinoma is associated with poor prognosis

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Jul 14, 2006 (publication date) through Oct 2, 2024

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World Journal of Gastroenterology

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1007-9327

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

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World J Gastroenterol. Jul 14, 2006; 12(26): 4143-4148
Published online Jul 14, 2006. doi: 10.3748/wjg.v12.i26.4143

Table 1 Locations and sequences of microsatellite markers, trefoil factor family genes and reference loci

Primer name	Chromosome	Product size (bp)	Forward primer	Reverse primer
D21S1253	21q21.3	174-190	GAAGAATCTCCCGAACCAGG	AAGACCAGTGTTATTCAGAGCC
D21S1255	21q22.2	112-126	AGCTCTTTATTTTGCCACATAG	CTGCATGTTTGCCTGG
D21S1893	21q22.2	111-119	GTATGCACACCACACGG	TAACAAAATCCGCCACG
D21S1890	21q22.3	143-173	GGTCTGACCACAGATTTCC	AAAAACACTCTGAACGATTAAGG
Trefoil factor family 1	21q22.3	219	CAGGGATCTGCCTGCATC	ATCGATCTCTTTTAATTTTTAGGCC
Trefoil factor family 2	21q22.3	123	GAAGAATCTCCCGAACCAGG	GTCACACTTCAAAAACTAGAGG
Trefoil factor family 3	21q22.3	129	CAGGCACTGTTCATCTCAGC	TATTCGTTAAGACATCAGGCTCC
β-actin	7p15	375	TCACCCACACTGTGCCCATCTACGA	CAGCGGAACCGCTCATTGCCAATGG
GAPDH¹	12p13	250	ACAGTCCATGCCATCACTGCC	GCCTGCTTCACCACCTTCTTG

¹Glyceraldehyde-3-phosphate dehydrogenase.

Citation: Muenphon K, Limpaiboon T, Jearanaikoon P, Pairojkul C, Sripa B, Bhudhisawasdi V. Amplification of chromosome 21q22.3 harboring trefoil factor family genes in liver fluke related cholangiocarcinoma is associated with poor prognosis. World J Gastroenterol 2006; 12(26): 4143-4148
URL: https://www.wjgnet.com/1007-9327/full/v12/i26/4143.htm
DOI: https://dx.doi.org/10.3748/wjg.v12.i26.4143