Copyright
©2005 Baishideng Publishing Group Co.
World J Gastroenterol. Jan 21, 2005; 11(3): 382-385
Published online Jan 21, 2005. doi: 10.3748/wjg.v11.i3.382
Published online Jan 21, 2005. doi: 10.3748/wjg.v11.i3.382
Table 1 Oligonucleotide primers used for cagA , vacA and iceA genotyping.
| Region detected | Primer designation | Primer sequence | PCR product (bp) |
| s1 and s2 | VA1-F | 5’ATGGAAATACAACAAACACACC3' | 259/286 |
| VA1-R | 5’CTGCTTGAATGCGCCAAACTTTATC3' | ||
| s1a | SS1-F | 5’GTCAGCATCACACCGCAAC3' | 190 |
| s1b | SS3-F | 5’AGCGCCATACCGCAAGAG3' | 187 |
| s1c | S1C-F | 5’CTYGCTTTAGTRGGGYTA-3' | 213 |
| m1 | VA3-F | 5’GGTCAAAATGCGGTCATGG3' | 290 |
| VA3-R | 5’CCATTGGTACCTGTAGAAAC3' | ||
| m1T | m1T-F | 5’GGCCACAATGCAGTCATGG3' | 290 |
| m1T-R | 5’CTCTTAGTGCCTAAAGAAACA3' | ||
| m2 | VA4-F | 5’GGAGCCCCAGGAAACATTG3' | 352 |
| VA4-R | 5’CATAACTAGCGCCTTGCAC3' | ||
| iceA1 | iceA1F | 5’GTGTTTTTAACCAAAGTATC3' | 247 |
| iceA1R | 5’CTATAGCCASTYTCTTTGCA3' | ||
| iceA2 | iceA2F | 5’GTTGGGTATATCACAATTTAT3' | 229 |
| iceA2R | 5’TTRCCCTATTTTCTAGTAGGT3' | ||
| lcagA | lcagAD008 | 5’ATAATGCTAAATTAGACAACTTGAGCGA3' | 297 |
| lcagAR008 | 5’TTAGAATAATCAACAAACATCACGCCAT3' |
- Citation: Lin HJ, Lo WC, Perng CL, Tseng GY, Li AFY, Ou YH. Mucosal polymerase chain reaction for diagnosing Helicobacter pylori infection in patients with bleeding peptic ulcers. World J Gastroenterol 2005; 11(3): 382-385
- URL: https://www.wjgnet.com/1007-9327/full/v11/i3/382.htm
- DOI: https://dx.doi.org/10.3748/wjg.v11.i3.382