Gene expression profile differences in gastric cancer, pericancerous epithelium and normal gastric mucosa by gene chip

Table 5 Comparison between molecular functions of 21 genes in T, P and C.

Probe Set ID	T vs C SLR	P vs C SLR	Name	GO molecular function
201655-s-at	3.1	2.6	Heparan sulfate	GO:5198; structural molecule activity; inferred from electronic annotation
			proteoglycan 2 (perlecan)	GO:5206; heparin sulfate proteoglycan; traceable author statement
201890-at	3.1	1.6	Ribonucleotide reductase	GO:4748; ribonucleoside-diphosphate reductase activity;non-traceable
			M2 polypeptide	author statement
				GO:16491; oxidoreductase activity; inferred from electronic annotation
201926-s-at	3.1	1	Decay accelerating factor for complement (CD55, Cromer blood group system)	Unknown
203334-at	3.1	3.8	DEAD/H (Asp-Glu-Ala—Asp/His) box polypeptide 8(RNA helicase)	GO:3723; RNA binding; inferred from electronic annotation
				GO:8248; pre-mRNA splicing factor activity; traceable author statement
				GO:5524; ATP binding;inferred from electronic annotation
				GO:4004; ATP dependent RNA helicase activity; traceable author statement
202870-s-at	3.3	1.5	CDC20 cell division cycle 20 homolog (S. cerevisiae)	Unknown
209035-at	3.3	1.6	Midkine (neurite growth- promoting factor 2)	GO:8201; heparin binding; not recorded
				GO:8083; growth factor activity; not recorded
				GO:5125; cytokine activity; not recorded
209803-s-at	3.4	1.8	Tumor suppressing subtransferable candidate 3	Unknown
212444-at	3.4	1.2	Homo sapiens, clone IMAGE:4471726, mRNA	Unknown
217173-s-at	3.4	3.6	Low density lipoprotein receptor (familial hypercholesterolemia)	GO:5041; low-density lipoprotein receptor activity; traceable author statement
				GO:5509; calcium ion binding; inferred from electronic annotation
				GO:8034; lipoprotein binding; traceable author statement
				GO:5319; lipid transporter activity; inferred from electronic
217221-x-at	3.5	2.2	RNA binding motif protein 10	GO:3676; rrm; nucleic acid binding activity; 8.4e-05; extended: inferred from electronic annotation
				GO:3676; rrm; nucleic acid binding activity; 0.76; extended: inferred from electronic annotation
202855-s-at	3.6	1.2	Solute carrier family 16 (monocarboxylic acid transporters), member 3	GO:8028; monocarboxylic acid transporter activity; traceable author statement
				GO:15355; monocarboxylate porter activity; inferred from electronic annotation
				GO:15293; symporter activity; inferred from electronic annotation
203559-s-at	3.6	1.2	Amiloride binding protein 1(amine oxidase (copper-containing))	GO:8144; drug binding;not recorded
				GO:8201; heparin binding; inferred from electronic annotation
				GO:8122; amine oxidase (copper-containing) activity; inferred from electronic annotation
				GO:16491; oxidoreductase activity; inferred from electronic annotation
209373-at	3.8	1.6	BENE protein	Unknown
203108-at	4.2	1.5	Retinoic acid induced 3	GO:8067; metabotropic glutamate, GABA-B-like receptor activity; inferred from electronic annotation
				GO:4872; receptor activity; inferred from electronic annotation
202067-s-at	4.5	3.8	Low density lipoprotein receptor (familial hypercholesterolemia)	GO:5041; low-density lipoprotein receptor activity; traceable author statement
				GO:5509; calcium ion binding; inferred from electronic annotation
				GO:8034; lipoprotein binding; traceable author statement
				GO:5319; lipid transporter activity; inferred from electronic
218900-at	4.5	3.7	Cyclin M4	Unknown
201884-at	4.6	2.1	Carcinoembryonic antigen-related cell adhesion molecule 5	GO:8222; tumor antigen; traceable author statement
211657-at	5.9	2.1	Carcinoembryonic antigen- related cell adhesion molecule 6	GO:8222; tumor antigen; traceable author statement
212768-s-at	4.7	1.3	Differentially expressed in hematopoietic lineages	Unknown
208250-s-at	6.3	1.7	Deleted in malignant brain tumors 1	GO:8181; tumor suppressor; predicted/computed
				GO:5044; SRCR; scavenger receptor activity; 3.7e-42;extended: unknown
204855-at	7.7	4.2	Serine (or cysteine) proteinase inhibitor, clade B (ovalbumin) member 5	GO:4868; serpin; not recorded GO:4867; serine protease nhibitor activity; inferred from electronic annotation
				GO:8181; tumor suppressor; traceable author statement serp