Identify lymphatic metastasis-associated genes in mouse hepatocarcinoma cell lines using gene chip

doi:10.3748/wjg.v11.i10.1463

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Mar 14, 2005 (publication date) through Dec 12, 2024

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World Journal of Gastroenterology

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1007-9327

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Baishideng Publishing Group Inc, 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA

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World J Gastroenterol. Mar 14, 2005; 11(10): 1463-1472
Published online Mar 14, 2005. doi: 10.3748/wjg.v11.i10.1463

Table 3 Differential molecular function profile in cell lines Hca-F vs Hca-P.

Transporter activity
Gja1 gb: BC006894	6.4	Slc38a4 gb: AK003626	3.4
gb: M63801	7.2	gb: NM_027052	9
Ramp3	3.6	Rab3b	5.6
Scn8a	4
Tptih	3.3
Structural molecule activity
Eppk1	3.6	Cldn9	7.4
Col8a1	4.9	Krt1-19	7.4
Tuba4	3.3	Krt2-7	5.2
Krt2-8 gb: NM_031170	4.8	Krt1-18	5.1
gb: M21836	8.6
Chaperone activity
Serpinh1	4	Sncg	5
Motor activity
Myo1b gb: BI080370	3.2	Myo1g	3.3
gb: AI255256	3.4
Catalytic activity
Gcnt2	4.2	Siat10	3.3
Chst1	3.2	Loxl2	3.7
Ltb4dh	5.2	2310047E01Rik	3.1
Hydrolase activity
Pla2g1b	6.4	Smpd2	4.3
Abhd3	3.6	Ptpn8	5.6
Ptpre	3	Chi3l3	4.1
Rrad	3.4	Rab3b	5.6
Chi3l4	3.4	Ptprr	4.1
Pla2g7	4.4	Fbp2	7.1
Psmb8	3
Kinase activity
Ccnd1 gb: M64403	3.2	Krt2-8 gb: NM_031170	4.8
gb: NM_007631	3.1	gb: M21836	8.6
A530090O15Rik	3.4
Protein-tyrosine kinase activity
Sgk2	3.1	Egfr gb: AF275367	6.9
Axl	4	gb: U03425	3.6
Ripk3	6.4
Transmembrane receptor protein kinase activity
Egfr gb: AF275367	6.9
gb: U03425	3.6
Protein serine/threonine kinase activity
Sgk2	3.1	Mak	3.9
Axl	4	Egfr gb: AF275367	6.9
Ripk3	6.4	gb: U03425	3.6
Transferase activity
A530090O15Rik	3.4	Axl	4
Ccnd1 gb: M64403	3.2	Egfr gb: AF275367	6.9
gb: NM_007631	3.1	gb: U03425	3.6
Chst1	3.2	Gcnt2	4.2
Krt2-8 gb: NM_031170	4.8	Mak	3.9
gb: M21836	8.6	Ripk3	6.4
Sgk2	3.1	Siat10	3.3
Enzyme regulator activity
Ccnd1 gb: M64403	3.2	Lxn	3.1
gb: NM_007631	3.1	Timp1	3.2
Sh3bp5	5.5	Cd109	5.9
1600023A02Rik	5.3	Serpinh1	4
Binding
Nucleic acid binding
Fosl1 gb: NM_010235	5	Ankrd1 gb: NM_013468	5.3
gb: U34245	4.3	gb: AK009959	3.6
Nr1d1	4.6
Metal ion binding
Pla2g1b	6.4	Smpd2	4.3
Ltb4dh	5.2	Scn8a	4
2310047E01Rik	3.1	Pcdhb7	4.9
2810003C17Rik	4.6	Loxl2	3.7
Zdhhc2	3.5
Nucleotide binding
A530090O15Rik	3.4	Axl	4
Egfr gb: AF275367	6.9	Krt2-8 gb: NM_031170	4.8
gb: U03425	3.6	gb: M21836	8.6
Mak	3.9	Rab3b	5.6
Myo1b gb: BI080370	3.2	Ripk3	6.4
gb: AI255256	3.4	Rrad	3.4
Scn8a	4	Sgk2	3.1
Tuba4	3.3
Receptor binding
Areg	4.3	Csf3	4.7
Dok1	3.6	Fgf15	5.4
Il24	5.9	Pla2g1b	6.4
Protein binding
Ankrd1 gb: NM_013468	5.3	Ccnd1 gb: M64403	3.2
gb: AK009959	3.6	gb: NM_007631	3.1
Cav	5.8	Cdc42ep5	4.4
Col8a1	4.9	Eng	4.5
D7Ertd458e
gb: BC013673 1423903_at 3.8		Egfr gb: AF275367	6.9
gb: BB049138 1423904_a_at 4		gb: U03425	3.6
gb: BB049138 1423905_at 3.9		Fibp	3.6
gb: NM_009310 4.2		IL2rg gb: L20048 1416295_a_at 3.3
gb: BC013673 1451160_s_at 4		gb: L20048 1416296_at 4.3
Itgb5 gb: NM_010580	3.5	Igfbp6	3.3
gb: NM_010580	3.3	Lepr	6.7
Nol3	3.3	Pcdhb7	4.9
Procr	4.6	Ptpre	3
Rab3b	5.6	Rrad	3.4
Sh3bp5	5.5	Tnfrsf22	3.5
Fscn1 gb: NM_007984 1416514_a_at 5.4		Myo1b gb: BI080370	3.2
gb: BE952057	4.2	gb: AI255256	3.4
gb: NM_007984 1448378_at 3.7		Cnn2	5.2
Carbohydrate binding
Chi3l3	4.1	Chi3l4	3.4
Signal transducer activity
Dok1	3.6	Ripk3	6.4
Receptor activity
Axl	4	Itgb5 gb: NM_010580.1	3.5
D7Ertd458e gb: BC013673 1423903_at 3.8		gb: NM_010580.1	3.3
gb: BB049138 1423904_a_at 4		Nr1d1	4.6
gb: BB049138 1423905_at 3.9		Procr	4.6
gb: NM_009310 4.2		Ptpn8	5.6
gb: BC013673 1451160_s_at 4		Ptprr	4.1
Ramp3	3.6	Tnfrsf19	3.4
Tnfrsf22	3.5	Lepr	6.7
IL2rg	gb: L20048.1 1416295_a_at 3.3	Egfr gb: AF275367.1	6.9
gb: L20048.1 1416296_at 4.3		gb: U03425.1	3.6
F2r	4.5

Citation: Song B, Tang JW, Wang B, Cui XN, Hou L, Sun L, Mao LM, Zhou CH, Du Y, Wang LH, Wang HX, Zheng RS, Sun L. Identify lymphatic metastasis-associated genes in mouse hepatocarcinoma cell lines using gene chip. World J Gastroenterol 2005; 11(10): 1463-1472
URL: https://www.wjgnet.com/1007-9327/full/v11/i10/1463.htm
DOI: https://dx.doi.org/10.3748/wjg.v11.i10.1463