Gene expression differences of regenerating rat liver in a short interval successive partial hepatectomy

Table 2 The comparison of difference of gene expression in SISPH with that after in PH

Gene description	Fold difference		Gene description	Fold difference
	SISPH	PH		SISPH	PH
Unreported genes			Cytochrome P450 (PNCN inducible, Cyp3A1)	0.4	0.2
AW558171	0.2	0.3	Cytochrome P450 2E1	0.1	0.1
CG31759-PA	2	2.9	Cytochrome P450, 2c39 (Cyp2c39)	0.4	0.1
CH230-155H3	0.3	0.3	CytP450 arachidonic acid epoxygenase (cyp 2C23)	0.2	0.2
CH230-155H3	2.6	2.2	Flavin-containing monooxygenase 1 (Fmo1)	0.1	0.1
CH230-186B23	0.1	0.2	Paraoxonase 1 (Pon1)	0.1	0.2
CH230-206C20	0.2	0.3	Selenium-dependent glutathione peroxidase	0.2	0.4
CH230-329A5	0.5	0.3	Regulation-proteins
CH230-372C24	0.1	0.1	II-protein with tetratricopeptide repeats 3	2.3	0.2
CH230-403C20	0.3	0.2	RAKb	0.5	0.2
CH230-4L11	4	4.5	Glycoproteins
CH230-7A22	0.1	0.1	Alpha-1-B glycoprotein (A1bg)	0.1	0.1
Citb585c7	0.3	0.2	Fibrinogen, gamma polypeptide (Fgg)	7.2	7.2
KIAA1230	2.8	2.6	Fibronectin 1 (Fn1)	5	7.2
LOC119392	2.3	2.1	Histidine-rich glycoprotein (Hrg)	0.4	0.1
LRRP Aa1027	4	2.1	Myelin-associated glycoprotein (L-MAG)	0.3	7
LRRP Aa2-020	0.5	0.4	TRAM1	2.6	5.1
LRRP Aa2-066	0.4	0.4	UDP-glucuronosyltransferase 2B3 (Udpgt)	0.3	0.3
LRRP Aa2-174	0.1	0.1	Lipid-proteins
LRRP Aa2-296	3.1	2.1	Apolipoprotein C-I (Apoc1)	0.4	3.3
LRRP Ab1-021	4.9	8.1	Apolipoprotein C-II	0.3	0.3
LRRP Ab1-046	2.9	0.5	Apolipoprotein C-III	0.4	0.5
LRRP Ab1-108	3	2.9	C57BL/6J	2.2	7.3
LRRP Ab1-114	3.4	4.2	Fatty acid binding protein 1 (Fabp1)	0.2	0.3
LRRP Ab1-152	0.5	0.4	Plasma retinol-binding protein (PRBP)	0.5	0.4
LRRP Ab1-216	4.7	6.8	Transthyretin-related protein (TTN)	0.2	0.3
LRRP Ab1-331	3	2.2	Nucleolar proteins
LRRP Ab1-334	3.6	2.7	RNase A family 4	0.4	0.2
LRRP Ab2-001	0.5	0.2	Receptors
LRRP Ab2-001	0.5	0.2	Cocoa protein	5.5	4.6
LRRP Ab2-008	2.1	2.1	Nuclear receptor subfamily 0, mem 2 (Nr0b2)	0.2	0.2
LRRP Ab2-034	3	2.3	Type I interleukin 1 receptor (Il1r1)	6.2	7.8
LRRP Ab2-095	4.6	3.1	Factors
LRRP Ab2-132	0.4	0.1	Angiogenin	0.3	0.2
LRRP Ab2-143	2	3.3	Angiopoietin-like 3	0.5	0.2
LRRP Ab2-225	0.3	0.3	Early growth response factor 1 (Egr1)	2.4	3.6
LRRP Ab2-379	3.1	2.2	Eukaryotic translation initiation factor 4A1	2.5	3.8
LRRP Ab2-402	0.4	0.1	Insulin-like growth factor I	0.5	0.5
LRRP Ac1-060	2.7	0.4,2.3	Neuropeptide Y (Npy)	3.9	18.2
LRRP Ac1-163	0.5	0.4	Hemoglobins
LRRP Ac1177	0.4	0.4, 3.3	Hemoglobin, alpha 1 (Hba1)	0.3	0.3
LRRP Ac1-233	3.3	4.2	Hemoglobin beta chain (Hbb)	0.3	0.3
LRRP Ac1873	7.1	6	Immunological proteises
LRRP Ac2-061	3.8	7.6	Achaete-scute complex homolog-like 1 (Ascl1)	0.3	0.4
LRRP Ac2-125	0.2	0.3	Complement component 5 (C5)	8.6	8.8
LRRP Ac2-143	4	3.3	Immunoglobulin C kappa	0.2	0.2
LRRP Ac2-193	3.1	2.3	JE/MCP-1	6.1	4
LRRP Ac2-202	4.1	2.5	Cytoskelets
LRRP Ac2-223	2.1	2.4	Actin gamma	2.7	4.7
LRRP Ba1-647	3.9	3.2	Clathrin, heavy polypeptide (Hc) (Cltc)	2.7	3.3
LRRP Bm403207	7.9	5.7	Karyopherin (importin) alpha 2	0.4	0.4
LRRP Cc1-27	0.4	2.2	Marker proteins
LRRP Cc1-8	2.6	2.3	ATP-binding cassette, sub-family C	0.3	0.4
LRRP Cc1-9	4.7	2.5	Pregnancy-zone protein (Pzp)	4.7	2.4
LRRP Da1-24	2.8	3.5	Serum amyloid a-5 protein	45.1	90.5
LRRP Da1-6	2.9	2	Subchromosomal transferable fragment 4	0.5	0.3
LRRP zbs559	0.4	3.1	Amino acid enzymes
RIKEN 1110061A24	3.5	3	Cytosolic aspartate aminotransferase	5.1	5.3
RIKEN 1300002A08	0.4	0.3, 2.4	2-hydroxyphytanoyl-CoA lyase (Hpcl2)	0.4	0.4
RIKEN 2810051A14	2	2.7	Proteolytic enzyme
RP11-281N10	0.5	0.3	Cathepsin C (Ctsc)	0.4	0.4
RP23-195K1	3.9	2.4	Proteinase inhibitor
RP23-235O1	0.4	0.2	Alpha-1 microglobulin/bikunin (Ambp)	0.4	2.1
RP23-35D4	0.5	0.4, 2.8	Alpha-2-macroglobulin (A2m)	8.1	21.3
RP23-417P22	0.4	0.1	Alpha-1-macroglobulin	3.1	2
RP23-480P21	0.5	0.4	Contrapsin-like protease inhibitor (CPi-26)	14.1	6.6
RP24-347B22	3	2.2	Leuserpin-2 (Serpind1)	0.5	0.2
RP32-28p17	0.4	0.3	Serine protease inhibitor 1	4.6	5
Adult male liver cDNA	6.4	0.1	Phosphorylases
DNA segment of Chr 1	3.9	6.1	CDK110	0.5	0.5
13 d embryo liver cDNA	0.5	5.9	Mss4 protein	3.6	2.1
Stress response			Thymidylate kinase (dTMP kinase)	2.8	3
Alpha-1 major acute phase protein prepeptide	13.6	6.2	Phosphatases
Petaxin	2.6	2.2	Pyrophosphatase/phosphodiesterase 1(Enpp1)	4.2	6.6
Angiotensinogen (Agt)	5.8	8.4	Phosphatase 1 (GL-subunit)	0.2	0.2
Kininogen	8	3.4	Phosphatidylserine-specific phospholipase A1	3	2.8
T-kininogen	16.1	5.9	Synthase
Glycometabolism			Carbamyl phosphate synthetase I	3.3	2.9
Aldolase B	0.4	0.3	Transferases
Glycerol 3-phosphate dehydrogenase (Gpd3)	0.5	0.4	Carnitine O-octanoyltransferase (Crot)	0.3	0.3
Isocitrate dehydrogenase 1 (Idh1)	0.4	0.3	Glutathione S-transferase 1 (Mgst1)	0.5	0.4
Fatty and stearoyl metabolism			Glutathione S-transferase Y(b) subunit	0.4	0.3
Malonyl-CoA decarboxylase	0.4	0.3	Glutathione S-transferase, alpha 1 (Gsta1)	0.1	0.1
NAD(P) dependent steroid hydrogenase	0.5	0.4	Glutathione S-transferase, type 3 (Yb3) (Gstm3)	0.4	0.3
P450 cholesterol 7- -hydroxylase (P450 VII)	3	0.5, 2.3	Sialyltransferase 1 (Siat1)	4.4	2.6
Prostaglandin D2 synthase 2 (Ptgds2)	2	3	Sulfotransferase K2	0.2	0.3
3-alpha-hydroxysteroid dehydrogenase	0.3	0.2	UDP-glucuronosyltransferase 2, mem 5 (Ugt2b5)	0	0.3
Oxidation and reduction response
Acyl-coA oxidase	0.2	0.4, 2.7
Alcohol dehydrogenase (ADH)	0.4	0.1, 2.4
Cytochrom P450 15-beta (Cyp2c12)	0.1	0.2
Cytochrome b	0.5	0.5
Cytochrome b5 (Cyb5)	0.4	0.2
Cytochrome P450	0.2	0.2